Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8000g00001 ATGGCTACTTTCACCTGCTCCGCTTCCGACCTCCACACTCTCCTTGGCAGCGGCGCAAACTCCACCGCGGCTGCTGAATACATTTGTGGCGGCTTCAACTCCGTTGCAAACAAATTCATCGACACTTCCTACGCCATTGACAACACCTACCTTCTCTTCTCCGCATACCTTGTTTTCGCAATGCAACTTGGTTTCGCAATGCTTTGTGCTGGTTCCGTTCGCGCCAAAAACACCATGAACATTATCCTAACCAACATTCTCGACGCTGCAATAGGCGGCCTTTTTTTCTATATCTTCGGTTTTGCCCTTGCTTTCGGCACACCTTCAAACGGTTTCATTGGAAAACATTTTTTCGGTCTAAACGATTTCCCTTCGCAGTCTTTTGATTTCGGTTTTTTTCTCTTTCAATGGGCTTTTGCAATTGCTGCAGCAGGAATAACAAGCGGATCAATTGCCGAAAGAACACAATTCGTTTCTTATTTGATTTATTCGTCTTTATTAACCGGTTTAGTTTATCCAATTGTTGCTCATTGGTTTTGGTCTTCTGATGGTTGGGGTAGTCCTGTTAGAACTGAGAATCTTTTGTTTGGTTCTGGTGTTATTGATTTNGCTGGTTGTGGTGTTGTTCATTTAGTTGGTGCTATTGCTGGTTTTTGGGGTGCTTTTATTGAAGGACCAAGAATTGGTAGATTTGATAAAGAAGGCAAAAGTGTTCCTATAAGAGGACATAGTGGAACTTTAGTTGTTATGGGA 753 0.4276 MATFTCSASDLHTLLGSGANSTAAAEYICGGFNSVANKFIDTSYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIILTNILDAAIGGLFFYIFGFALAFGTPSNGFIGKHFFGLNDFPSQSFDFGFFLFQWAFAIAAAGITSGSIAERTQFVSYLIYSSLLTGLVYPIVAHWFWSSDGWGSPVRTENLLFGSGVIDXAGCGVVHLVGAIAGFWGAFIEGPRIGRFDKEGKSVPIRGHSGTLVVMG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8000g00001 251 PANTHER AMMONIUM TRANSPORTER 21 251 - -
Trme8000g00001 251 Pfam Ammonium Transporter Family 50 251 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme8000g00001 251 SUPERFAMILY Ammonium transporter 45 251 - -
Trme8000g00001 251 Gene3D Ammonium transporter AmtB like domains 26 251 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8000g00001 Trme-Chr8000 1099 1851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8000g00001 2 251 Inorganic Solute Cotransporters AT4G28700 77.075 6.59e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8000g00001 K03320 - twl:120011591 404.831