Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme799g00001 ATGGCTGAACAAAATCTATTCGGTGTTGCTGAAAGCCTCATTAAAAGTTTGGCTTCTGCTGCCTTACGTGAATTTGGACGGATTAATGGTGTTCTGGATGAATTGGAAAGACTTAAGAACACAGTTGAATCTATTAGAGCTGTGCTGCTTGATGCTGAGGACAAACAAGACCAAAGTCATGCTGTACAAAACTGGATAAGAAGGCTCAAAGATGTGCTTATTCCTGCAGATGACTTGTTAGATGAATTTGTTATTCAAGATATGATATACAAAAGGGATGAAGCTCATCGAAACAAAGTAACAAAGGTACTTCATTCCTTATCTCCAAACAGAATTGCTTTTCGCCATAAAATGGCTCATGAGATTGAAAAAGTTCAAAAACAATTTAATGATGTTGTGAAAGATATGTCTGGGTTGAATCTAAACCCGCATATTGTGGTGGTTGAGCAAAGTAACAATGTAAGGAGGGAAACTTGTTCTTTTGTGTTAGAATCAGATATCATTGGGAGAGAAGATGATAAAAAGGAGATTATAAACTTGTTGAAACAACACCATGGAAATCAGAATGTCTCACTGGGTGCTATTGTTGGGATTGGTGGTTTGGGAAAGACAGCTCTTGCTCAGTTGGTATATAATGATGGAGAAGTGCAAAATTTGTTTGAAAAGCATATGTGGGTATGTGTCTCAGAAACTTTTGAAGTCAAAACCATTTTGAAGAAGATGTTGGAGTCATTAACCAAGAACAAAATCGATGATTCATTATCATTGGACAACTTGCAAAATATGTTTCGTGACAATTTAAATGGGAAGAGATACTTGTTAGTTCTGGATGATGTTTGGAATGACAATTATGAAAAATGGGCACAATTGAGAACTTACTTAATGTGTGGTGCTAGAGGCAGTAAGGTTTTAGTGACAACCCGCAGTACTAATGTGGCACAAACAATGGGTGTAAGTGTTCCATATGTTTTGAATGGTTTGATCTTAGAAGAATCTTGGAGTTTATTAAAGAAAATTACATTTGGAGATGATACCATTGAAGTGAATCGAACTATTGAATCAATCGGTAACAAGATTGCAAAAAAGTGCAAAGGAGTTCCATTAGCAATTAGATCATTGGGAGGCATATTACAAAGTAAAAGTGAAGAAAAGGAATGGATCAATGTCTTACAAGGTGACTTTTGGAAATTGTGTGAGGATAAAGAGAGCATCTTGCCTGTCCTAAAATTGAGTTACCAAAACTTGTCGCCTGAACAGAGACAATGTTTTGCTTATTGCTCTTTATATCCTAAGGATTGGGTAATTGAAAAGGACGAGTTGATTCAAATGTGGATGGGTCAAGGTTATCTTGAATGTTCAGATGTTGGTAACCAATTTGTGAAACTTTTCTTGATGAAATCATTCTTCCAGGATGCAAATATGAATCAAGATGGTGATATAAATGGTTTTAAAATGCATGATTTAATGCATGATCTTGCTACACAAGTAGCAGGAAATGATTGTTGTTACTTGGGTAGTAAGGAAAAAAGATGTCTAGGAAGGCCGATGCATGTATCAATGGACTCTGATGCATATTGTTTGTTGGAATCATTGGATGCAAGTAGGTTGCGAACTTTGATTCTGTTCACTTCCCCTGACGAGAAGAAACTAGCAGTTGTTTCAAATTTCAAATTCTTACGTGTCTTGAAGCTGAAGTATTCTTCTATGAGCATGCTATCCAGTTCAATTGAAAAATTGAAGCATTTAAGATATCTTAACTTATTAAGATGTTATGGACTAGAAAGTCTTCCCAAATCCATAGACAATCTTGTTTGTTTACAAACAATAAAAGTGTCATTGGATGAAGAAGTTGTACTTTCTACGAAAGTTATCTCAAAATTAATCAATTTGAGACACCTTGAGATTAATGAATGGATCTACAAAGACATGATGTCGGTTGGACAACACAAGGGAATGATATTTTCAAAATGGCTTTCTCCACTCACAAATATTACTGAAATATCTCTTCGTCATTGTGCAGGCTTACGACATCTCCCACCAATGGAACGTCTTCCATTCCTTAAGTCACTTGAGTTAACTTCCCTTTATGATTTGGTATACATATGTTACGAAGAGCCTATTCTTCATGAATCATTCTTCCCATCTTTGGAGAGCCTACAGTTGCATGAATGTGATGAGCTAAAGGGGTGGATGAGAGTGGGAGATGATTTCAATGATATTAACTCTTCACATCATATTTTATTGCCTCAGTTTTCTTGTCTATCTAAATTGATAATTATACGGTGTCCGATGTTGACTTGCATGCCTACTTTTCCTAACATTAAGACATTATCATTGAAAGGTTTTGGTGTGGAGATATTGGAAGCAACACTGTCACAATGTTCGATTGGCTCCCCTCCTTTTTCTATGCTCAAATCCTTGCAAATTAATGATAACTTTATGGATGGGGAAAAAGTCCCACATGATTGGTTGCAAAATCTTATTTCTCTCAAAAATCTTGATCTTGTTCGTCTTTCAAGTCAACATTTTCAAGCAATTGAAATATGGTTCAAGGATGACATCAATTATCTTCCTTCCCTCCAAAAAATCACCTTTCTTTTTTGTAACGATCTAAAGGCATTGCCAGATTGGATATGCAAGATCTCATCACTTCAGCATATCAAGATAGACTATTGCCATGGATTGTCATTGCTGCCTAAAGGAATGACACGTCTTACCAACTTACATACCTTAGAAATCATTGGATGTACACTCTTAATTCAAGAATGTCAGAAAGAAACTACTACTATTTTTAGATACCCTAGAATTGCACACATCCCAAACATAATCATCAAGTGA 2838 0.3584 MAEQNLFGVAESLIKSLASAALREFGRINGVLDELERLKNTVESIRAVLLDAEDKQDQSHAVQNWIRRLKDVLIPADDLLDEFVIQDMIYKRDEAHRNKVTKVLHSLSPNRIAFRHKMAHEIEKVQKQFNDVVKDMSGLNLNPHIVVVEQSNNVRRETCSFVLESDIIGREDDKKEIINLLKQHHGNQNVSLGAIVGIGGLGKTALAQLVYNDGEVQNLFEKHMWVCVSETFEVKTILKKMLESLTKNKIDDSLSLDNLQNMFRDNLNGKRYLLVLDDVWNDNYEKWAQLRTYLMCGARGSKVLVTTRSTNVAQTMGVSVPYVLNGLILEESWSLLKKITFGDDTIEVNRTIESIGNKIAKKCKGVPLAIRSLGGILQSKSEEKEWINVLQGDFWKLCEDKESILPVLKLSYQNLSPEQRQCFAYCSLYPKDWVIEKDELIQMWMGQGYLECSDVGNQFVKLFLMKSFFQDANMNQDGDINGFKMHDLMHDLATQVAGNDCCYLGSKEKRCLGRPMHVSMDSDAYCLLESLDASRLRTLILFTSPDEKKLAVVSNFKFLRVLKLKYSSMSMLSSSIEKLKHLRYLNLLRCYGLESLPKSIDNLVCLQTIKVSLDEEVVLSTKVISKLINLRHLEINEWIYKDMMSVGQHKGMIFSKWLSPLTNITEISLRHCAGLRHLPPMERLPFLKSLELTSLYDLVYICYEEPILHESFFPSLESLQLHECDELKGWMRVGDDFNDINSSHHILLPQFSCLSKLIIIRCPMLTCMPTFPNIKTLSLKGFGVEILEATLSQCSIGSPPFSMLKSLQINDNFMDGEKVPHDWLQNLISLKNLDLVRLSSQHFQAIEIWFKDDINYLPSLQKITFLFCNDLKALPDWICKISSLQHIKIDYCHGLSLLPKGMTRLTNLHTLEIIGCTLLIQECQKETTTIFRYPRIAHIPNIIIK 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme799g00001 945 Gene3D - 412 496 IPR036388 -
Trme799g00001 945 Coils Coil 28 55 - -
Trme799g00001 945 Pfam Rx N-terminal domain 10 89 IPR041118 -
Trme799g00001 945 SUPERFAMILY RNI-like 712 918 - -
Trme799g00001 945 Gene3D - 10 123 - -
Trme799g00001 945 Pfam NB-ARC domain 170 414 IPR002182 GO:0043531
Trme799g00001 945 PANTHER DISEASE RESISTANCE PROTEIN RP 35 863 IPR044974 GO:0006952
Trme799g00001 945 Gene3D Ribonuclease Inhibitor 513 732 IPR032675 -
Trme799g00001 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 426 IPR027417 -
Trme799g00001 945 Gene3D - 327 411 IPR042197 -
Trme799g00001 945 Gene3D Ribonuclease Inhibitor 770 932 IPR032675 -
Trme799g00001 945 SUPERFAMILY L domain-like 474 787 - -
Trme799g00001 945 Gene3D - 151 322 IPR027417 -
Trme799g00001 945 PRINTS Disease resistance protein signature 363 377 - -
Trme799g00001 945 PRINTS Disease resistance protein signature 266 280 - -
Trme799g00001 945 PRINTS Disease resistance protein signature 577 593 - -
Trme799g00001 945 PRINTS Disease resistance protein signature 192 207 - -
Trme799g00001 945 FunFam Probable disease resistance protein At1g61300 148 321 - -
Trme799g00001 945 CDD RX-CC_like 8 137 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme799g00001 Trme-Chr799 259 3219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme799g00001 194 496 WRKY Transcription Factor Family AT5G45050 25.246 2.10e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme799g00001 - - tpra:123883200 1166.37