Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7999g00001 CCTAGTGGACAGCAGTTTGTGTCTTGCAAAGAAGTTTCTTCCTATTTGCAGTCTCGTTTTGGCCACTCTGATTTACAGTTACAAATCAGTCATAGGAGTGAAAGCATACTTCAAGAACAGAGAGTGACTACTGAAAATGAAATGTCCTTGTTGGAGATGGAGAACCTTGCAGATGTGCAAATACATGATCTGTTTGAATGTCACAAGTGCAACATGACCTTTGATGAGAAGGATGCGTACTTGGAGCACCTGTTGTCTATTCATCAGAAGACGACGAGGCGGTATCGACTTGGTTCATCTGTTTCAGATGGAGTTATAATTAAAGATGGGAAGTTTGAGTGCCAGTTCTGTCATAAAGTGTTTTTGGAAAAGCGTCGCTACAATAGTCATGTTGGGATACATGTAAGGAATTATTTGAGGAAAGCTGAAGATTTGCCGGGTCAGCCTAATGTCTTGAGAGCAGAAGAGTCTCCAGTCACAGATGAGATGCCTTCAAGGATCTCTAAGATGGATGCCCTCATCGAAATTGCTCAAAACTCTATTGTGGAGGATTCTGTCATGGAACCATGTTCCTCTAAACTGAATACGATTCATGTTTCAGAAATTGCAGCTGGTGACTTAGATGAAGACATAAACGTTGAGTCTCTGGTCAGTGAACAGCAAATGGAAGAGAGCTTGATTGGCCCAAATGTAGTTCGCGATTTAAATCAGCAAGATAGTCCTCGTTTACCCATGGGTGGAACAATAGAGAAAATTGACAACGATAACCGAGTTATTAATGCAAAGACGTCTAGTTTTCTAGATAACACAGGCTTGTTATCTGTAAATAATAAAAATGTTGATGCACCTGATACTTCTAAAGGAAAAGGTGATGCGGCGCTGACTGTTGAGGGATTTGATCATTCTGGGATTGATCTGCAAGGAGTTTCTCAAGTCCCGTTGCTTCCTTCATTTGGGAATCACATGAAACCTGGATATGAGAAGAGTGAAAATTCTGGTTGCACTAATACTAAGGGGGATCTTAGACTTGACGAAAACAATAGTAATAAAAGTGACTTGAAAATTGGTTTAGATGGCTGCAAGGATGTACCCGGTGTTGCTAATGTTCAAGTGACAGCAATGCCAACTTCTAAAGAAAATGTGATCCAATCTATG 1155 0.4061 PSGQQFVSCKEVSSYLQSRFGHSDLQLQISHRSESILQEQRVTTENEMSLLEMENLADVQIHDLFECHKCNMTFDEKDAYLEHLLSIHQKTTRRYRLGSSVSDGVIIKDGKFECQFCHKVFLEKRRYNSHVGIHVRNYLRKAEDLPGQPNVLRAEESPVTDEMPSRISKMDALIEIAQNSIVEDSVMEPCSSKLNTIHVSEIAAGDLDEDINVESLVSEQQMEESLIGPNVVRDLNQQDSPRLPMGGTIEKIDNDNRVINAKTSSFLDNTGLLSVNNKNVDAPDTSKGKGDAALTVEGFDHSGIDLQGVSQVPLLPSFGNHMKPGYEKSENSGCTNTKGDLRLDENNSNKSDLKIGLDGCKDVPGVANVQVTAMPTSKENVIQSM 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7999g00001 385 SMART c2h2final6 65 88 IPR013087 -
Trme7999g00001 385 SMART c2h2final6 112 134 IPR013087 -
Trme7999g00001 385 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 345 IPR037472 -
Trme7999g00001 385 MobiDBLite consensus disorder prediction 324 347 - -
Trme7999g00001 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Trme7999g00001 385 Gene3D Classic Zinc Finger 29 139 - -
Trme7999g00001 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 93 IPR013087 -
Trme7999g00001 385 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Trme7999g00001 385 ProSitePatterns Zinc finger C2H2 type domain signature. 67 88 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trme7999g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7999g00001 - - lang:109329666 447.973