Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79864g00001 CAGAGGTATTGCCGCGGTTGGCTTGTGAAACGGAATTTCTTGTTCCAAAGAGATGCTATAATAAAGATCCAGAGTGTCAGTCGAAGTTTGAAATGCCAGAAAACACTCAATTGTCAGAAAGATGCTGCATTGGAGATCCAGCGCTTCATCAGGGGGCATTTAACTCGAAATCGGATATTAGGTAGTGCTTCAAAGTTACGTGCAGCTGATACTGGTAGTTGCACTTCGAGACCAGTTGGCTTACGTAGTTTTCAACTTGAAGCATTCATGTCTGCAGTAGTGAAATTGCAACGGTGGTGGAAGGGTCTCCTGTTGCTTAAACTAAGGATTCGATCGGCCATCTTAATCCAGTCTTGTACTCGTGGGTGGATAGCCAGGCGAAAGGCCACAGTTGAGACACACTGTATTAATGTCATGGAAGTATGA 426 0.446 QRYCRGWLVKRNFLFQRDAIIKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNRILGSASKLRAADTGSCTSRPVGLRSFQLEAFMSAVVKLQRWWKGLLLLKLRIRSAILIQSCTRGWIARRKATVETHCINVMEV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79864g00001 141 SMART iq_5 15 37 IPR000048 GO:0005515
Trme79864g00001 141 SMART iq_5 108 130 IPR000048 GO:0005515
Trme79864g00001 141 SMART iq_5 38 60 IPR000048 GO:0005515
Trme79864g00001 141 ProSiteProfiles IQ motif profile. 39 68 IPR000048 GO:0005515
Trme79864g00001 141 PANTHER UNCHARACTERIZED 4 138 - -
Trme79864g00001 141 Pfam IQ calmodulin-binding motif 41 58 IPR000048 GO:0005515
Trme79864g00001 141 Pfam IQ calmodulin-binding motif 111 128 IPR000048 GO:0005515
Trme79864g00001 141 Pfam IQ calmodulin-binding motif 1 13 IPR000048 GO:0005515
Trme79864g00001 141 Pfam IQ calmodulin-binding motif 17 34 IPR000048 GO:0005515
Trme79864g00001 141 Pfam IQ calmodulin-binding motif 91 104 IPR000048 GO:0005515
Trme79864g00001 141 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Trme79864g00001 141 Gene3D - 89 129 - -
Trme79864g00001 141 Gene3D - 16 69 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79864g00001 10 135 Myosins gene family AT5G43900 27.007 5.69e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79864g00001 K16743 - gmx:100788871 199.904