Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79728g00001 ATGGGGGGGATAGGAAAAACAACAATTGCTAGTGCAGCCTTTGGAAAACTCGCACTTCAGTTCAGTTCCAACAGCATCGTTCTAAATGTTCAACAAGAAATAGAAAAAGCTGGACTAGACCATGTAAAAAGCAAATATTTATCAAAACTTCTAGAGGAAGACATTAGATCCTCTGAATGCAACTTTTCATTTGATCCAAGGCTTAAAGAGACAAAGGTTCTTCTTGTTTTTGATGATGTAAAAGATTCTGATCAACTTAAAGATTTAATTGGAACTCATAGTAACTTTGGTCAGGGGAGTAGAATCATTGTGACTAGTAGAGACAAGCAAGTGCTGGTGAATGCCAATGCTGATGAAATATATGAAGTTAGGGGAATGGATCATCAAGATTCTCTAGAGCTCTTCTGTTTATTTGCCTTTAAACAAAATCATCCAATAGAATCTTATGTGAGCTTAGTGGAAAAGTTTTTAGATTATGCTAAAGGGCTTCCGTTAGCTCTCAAAGTTTTGGGCTCATTGCTTTACGGTAAAACAAAGGAAGTATGGGATAGTCAACTGCAAAAGCTTAAAAAGCTTCCTGATCTTAAAATTTTCAGATTGTTGAAATTGAGTTATGATGGACTTGACGACGAACAAAAGGATATATTTCTTGACATTGCTTGCTTCTAT 669 0.3572 MGGIGKTTIASAAFGKLALQFSSNSIVLNVQQEIEKAGLDHVKSKYLSKLLEEDIRSSECNFSFDPRLKETKVLLVFDDVKDSDQLKDLIGTHSNFGQGSRIIVTSRDKQVLVNANADEIYEVRGMDHQDSLELFCLFAFKQNHPIESYVSLVEKFLDYAKGLPLALKVLGSLLYGKTKEVWDSQLQKLKKLPDLKIFRLLKLSYDGLDDEQKDIFLDIACFY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79728g00001 223 Gene3D - 1 121 IPR027417 -
Trme79728g00001 223 PRINTS Disease resistance protein signature 67 81 - -
Trme79728g00001 223 PRINTS Disease resistance protein signature 160 174 - -
Trme79728g00001 223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 219 IPR027417 -
Trme79728g00001 223 Pfam NB-ARC domain 1 191 IPR002182 GO:0043531
Trme79728g00001 223 Gene3D - 126 209 IPR042197 -
Trme79728g00001 223 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 222 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79728g00001 Trme-Chr79728 1 669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79728g00001 3 223 WRKY Transcription Factor Family AT4G12020 35.111 8.54e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79728g00001 - - tpra:123916959 367.466