Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79682g00001 CCGAAAAAGTTTGGATCAAGTTCAGTGAAAGATATTTCGTATGAAACGCTGAAGCCTTCCGCGACTGATAATGGAATTGATAGTGTCGTTGCCGTGGAACGAAAATCAAGCATTTCTACGAGGTCTTCTGACGGATTAAACCACAAAGGATGGAATCAAGTGGTTATTCATCAATTCAAAGTTATTAAACAGAAGATAAAACATGCAATTGTGGAATTGAAAAAAAGTGGTCACAATAAAGCTTCACCTGAATACAGCATCATTGATAATGAGAAAGAGATCTCACAAAACATAGATGATGGCGCGATTCATGAATACAAAAAGAGTAAGAGCTTGAGTGAGACTAAAGCTTTTGAATCTAGTTCGAACAAACACGAACCTCGCCTAATGCGAAGAACGTCTTCTCTTAACGAATCGATGGATAGATATACTCAGTTGTTTGAGAAAAGTTTAAGCAAAGAGGTTAAGTGGCAAAGCTCAAAGTCGAAAAGTTTAAGATTGACAAATGACGATAAGACTCAAAAGAGCAGGCATGCTCGTATGTTTTCCAGAAGCAATTTGTCTATGCCTAATCTCGAGGCATTAGGATTCATTCTACATGAAGCTCTTCTTGAAACAAATGATATGGGAAATAATACAGTGGAAAGTGATAATGATGTTCAAAGTAAATCAGCGAGCCTTCCTTTAAAGAACGATGAATCAACTGATCATTTTAAAGAGGCTGAAATTGATGAAACAGTTGAAGGAAGTGGACGAGATGTGAATCCTAGTCCT 774 0.3721 PKKFGSSSVKDISYETLKPSATDNGIDSVVAVERKSSISTRSSDGLNHKGWNQVVIHQFKVIKQKIKHAIVELKKSGHNKASPEYSIIDNEKEISQNIDDGAIHEYKKSKSLSETKAFESSSNKHEPRLMRRTSSLNESMDRYTQLFEKSLSKEVKWQSSKSKSLRLTNDDKTQKSRHARMFSRSNLSMPNLEALGFILHEALLETNDMGNNTVESDNDVQSKSASLPLKNDESTDHFKEAEIDETVEGSGRDVNPSP 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79682g00001 258 PANTHER PROTEIN TRM32 8 249 IPR044257 -
Trme79682g00001 258 MobiDBLite consensus disorder prediction 158 178 - -
Trme79682g00001 258 MobiDBLite consensus disorder prediction 230 249 - -
Trme79682g00001 258 MobiDBLite consensus disorder prediction 209 258 - -
Trme79682g00001 258 MobiDBLite consensus disorder prediction 158 179 - -
Trme79682g00001 258 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79682g00001 Trme-Chr79682 1 774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79682g00001 49 250 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.317 1.74e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79682g00001 - - cam:101509220 339.732