Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79570g00001 ATGTTATCTAATGATTCTAATCTTAAGGGAGCAGAAGCTGTCAAGGGTCTGGCTTTGAAATTACCAAAAGAAAATATAGTTAGTCTCAACACCAAAGCATTTAAGAAGATGTATAAACTCAGATTGCTTCAACTTGCTGGGGTGAAACTTAAAGGAGATTTTAAACATCTTTCGGGAAATCTAAGATGGTTGTCCTGGCATGGATTTCCATTAACTTACATTCCTGCAGAATTTCAACAAGGAAGTTTAGTTGCCATCGAATTGAAATATAGTAATCTTAATCTCACACAAATGTGGATGAACAACAAGGTGCTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCAGGATTTGACTGAAACCCCAAACTTTTCATATATGCCTAATCTTGAAAAGATAGTACTCAAAGACTGTCCAAGT 423 0.3452 MLSNDSNLKGAEAVKGLALKLPKENIVSLNTKAFKKMYKLRLLQLAGVKLKGDFKHLSGNLRWLSWHGFPLTYIPAEFQQGSLVAIELKYSNLNLTQMWMNNKVLENLKILNLSHSQDLTETPNFSYMPNLEKIVLKDCPS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79570g00001 141 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 141 IPR044974 GO:0006952
Trme79570g00001 141 SUPERFAMILY L domain-like 19 139 - -
Trme79570g00001 141 Gene3D Ribonuclease Inhibitor 5 141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79570g00001 Trme-Chr79570 1 689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79570g00001 7 139 WRKY Transcription Factor Family AT4G12020 32.215 5.48e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79570g00001 - - mtr:11411578 208.764