Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79558g00001 CAAGATGCTTTCCCAAATATTAACTCTTTAAGAGGTTTGGATGTTGTGAACCAAATCAAAACAGCAGTCGAAAAGGCTTGTCCTAACACGGTTTCTTGTGCCGATATTCTTGCACTTGCCGCGGAATTATCTTCTACACTGTCTCAAGGTCCTGACTGGAAAGTTCCACTTGGAAGAAGGGATAGTTTAACCGCAAACCAAACACTTGCTAATCAAAACCTTCCGGCTCCTTTCAACTCATTAGATCAACTTAAAGCTGCATTTGCCGCTCAAGGCCTCAACACTACTGATCTAGTTGCTCTCTCGGGTA 310 0.4323 QDAFPNINSLRGLDVVNQIKTAVEKACPNTVSCADILALAAELSSTLSQGPDWKVPLGRRDSLTANQTLANQNLPAPFNSLDQLKAAFAAQGLNTTDLVALSG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79558g00001 103 SUPERFAMILY Heme-dependent peroxidases 2 103 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 ProSiteProfiles Plant heme peroxidase family profile. 1 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 Gene3D Peroxidase, domain 2 76 103 - -
Trme79558g00001 103 Gene3D - 1 75 - -
Trme79558g00001 103 PRINTS Haem peroxidase superfamily signature 31 48 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PRINTS Haem peroxidase superfamily signature 49 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PRINTS Haem peroxidase superfamily signature 97 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PANTHER PEROXIDASE 72-RELATED 2 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PRINTS Plant peroxidase signature 30 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PRINTS Plant peroxidase signature 49 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PRINTS Plant peroxidase signature 11 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 PRINTS Plant peroxidase signature 96 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme79558g00001 103 Pfam Peroxidase 2 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79558g00001 Trme-Chr79558 1 415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79558g00001 1 103 Peroxidase AT3G49120 62.500 2.16e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79558g00001 K00430 - gmx:112997600 168.318