Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7951g00002 GTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGATGATAACTTCTCCACAATAGTAACAGTGGCCAAATGGGGACGTTCCGTTTACATAAATATTCAGAAATTCGTACAGTTTCAGCTTACAGTTAATGTGGTTGCTTTAATAGTGAACTTTACATCAGCCTGCTTGACAGGAACTGCTCCCCTCACTGCTGTTCAACTTCTGTGGGTGAACATGATAATGGACACATTGGGAGCACTTGCGCTCGCAACTGAACCTCCAAATGATGATTTAATGAAGCGTTCACCTGTTGGAAGAAAAGGGAATTTCATCAGCAATGTCATGTGGAGGAATATCTTGGGACAATCACTGTATCAGTTTACGGTGATATGGTTTCTTCAGTCAAAAGGAAAATCCATCTTTTCGCTTGATGGCCCGAATTCGGATCTAGTCTTAAACACACTTATCTTCAACACATTTGTATTCTGTCAGGTTTTCAACGAGATAAACTCACGTGAGATGGAGAAAGTTAATGTTTTTAAAGGCATATTGGATAATTATGTTTTTGTGGGTGTCATCAGTGCTACAATTTTCTTTCAAATCATAATAGTCGAGTACTTGGGAACCTTCGCAAACACAACACCTCTCACTTTGGTACAGTGGTTCTTTTGCTTATTCGTTGGATTTCTAGGCATGCCTATTGCTGCTCAATTAAAGAAGATCCCCGTCTGA 711 0.3966 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNILGQSLYQFTVIWFLQSKGKSIFSLDGPNSDLVLNTLIFNTFVFCQVFNEINSREMEKVNVFKGILDNYVFVGVISATIFFQIIIVEYLGTFANTTPLTLVQWFFCLFVGFLGMPIAAQLKKIPV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7951g00002 236 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 235 IPR023298 -
Trme7951g00002 236 Gene3D - 1 235 - -
Trme7951g00002 236 Pfam Cation transporting ATPase, C-terminus 60 233 IPR006068 -
Trme7951g00002 236 PANTHER CATION TRANSPORTING ATPASE 1 235 - -
Trme7951g00002 236 FunFam Calcium-transporting ATPase 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7951g00002 Trme-Chr7951 765 1735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7951g00002 1 236 Primary Pumps ATPases AT4G37640 83.898 1.08e-141 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7951g00002 K01537 - gmx:100792691 455.677