Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme794760g00001 ATGGACAAAAGTAGTGTAGATGATGTTGTTCTTGTGGGTGGCTCGTCCAGGATTCCCAAAATTCAGGAATTATTGAGTGATTTCTTCAATGGGAAGGATTTGTGCAAAAACATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTGTGTTGTCTGAAGACATTAAGAAT 183 0.4262 MDKSSVDDVVLVGGSSRIPKIQELLSDFFNGKDLCKNINPDEAVAYGAAVQAAVLSEDIKN 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme794760g00001 61 Gene3D - 39 53 - -
Trme794760g00001 61 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Trme794760g00001 61 FunFam heat shock 70 kDa protein-like 4 57 - -
Trme794760g00001 61 PRINTS 70kDa heat shock protein signature 6 22 - -
Trme794760g00001 61 PRINTS 70kDa heat shock protein signature 38 58 - -
Trme794760g00001 61 PANTHER HEAT SHOCK PROTEIN 70KDA 1 59 IPR013126 GO:0005524|GO:0140662
Trme794760g00001 61 Pfam Hsp70 protein 1 58 IPR013126 GO:0005524|GO:0140662
Trme794760g00001 61 SUPERFAMILY Actin-like ATPase domain 2 56 IPR043129 -
Trme794760g00001 61 Gene3D - 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme794760g00001 Trme-Chr794760 1 183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme794760g00001 1 56 Calmodulin-binding Proteins AT3G12580 85.714 8.08e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme794760g00001 K03283 - lja:Lj0g3v0098949.1 96.2857