Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7941g00001 GTGTTCAATGAGATAAACTCTCGCGAGATGGAGGAAATAGACGTTTTTAAAGGTATATGGGATAATCATGTGTTTGTGACTGTCATCAGTGTAACTGTAGTCTTCCAAATCATAATAGTTGAGTACCTGGGAACCTTTGCCAATACAACACCTCTATCTCTGGTACAATGGATCTTTTGCTTAGGGGTTGGATATATGGGCCTGCCAATCGCAGTTCACTTAAAGCAGATACCAGTATGA 240 0.4042 VFNEINSREMEEIDVFKGIWDNHVFVTVISVTVVFQIIIVEYLGTFANTTPLSLVQWIFCLGVGYMGLPIAVHLKQIPV 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7941g00001 79 Gene3D - 1 78 - -
Trme7941g00001 79 Pfam Cation transporting ATPase, C-terminus 1 71 IPR006068 -
Trme7941g00001 79 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 78 IPR023298 -
Trme7941g00001 79 PANTHER CATION TRANSPORTING ATPASE 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7941g00001 Trme-Chr7941 111 350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7941g00001 1 79 Primary Pumps ATPases AT2G22950 70.886 7.60e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7941g00001 K01537 - gmx:100776926 138.658