Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7935g00001 ATGGGTTTGGGGATGATTTCATCACTTGCTATACATGTGGCAAATGTAGATAAATGGAATGTCAATGGTGCCACTGGCCAAAGTCTTGATTTCAAGCTGAGGCAAGCAGAAAGTAACCGAATGAATATCACTGTTAATCCAAATGGTGGTGCCGATTTCAAGACTATTACGGAAGCTATCAACAGCATTCCAGCACCCAACAGCAGAAGAGTTGTCGTTTTCATTGCGCCCGGTCTTTACAG 242 0.4339 MGLGMISSLAIHVANVDKWNVNGATGQSLDFKLRQAESNRMNITVNPNGGADFKTITEAINSIPAPNSRRVVVFIAPGLY 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7935g00001 80 Gene3D - 7 80 IPR012334 -
Trme7935g00001 80 SUPERFAMILY Pectin lyase-like 41 80 IPR011050 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7935g00001 28 80 Carbohydrate Esterase AT5G07430 54.717 4.02e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7935g00001 K01051 - tpra:123885915 90.1225