Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79305g00001 ATGTCGAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGCTGTTCAGCAGGAGGATTATCGGCTATACTACATTGCGATGAATTTCGGGAATTATTTCCTAGATCAACTAGAGTAAAGTGCTTTAGTGACGCTGGATTATTCCTTGACTCTATTGATGTATCTGGCCGTCGCAGTTTAAGGAATTTTTTTGGAAGTGTAGTCACCTTACAG 216 0.4213 MSKGMRYAKQALLSGCSAGGLSAILHCDEFRELFPRSTRVKCFSDAGLFLDSIDVSGRRSLRNFFGSVVTLQ 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79305g00001 72 PANTHER NOTUM-RELATED 1 72 IPR004963 GO:0016787
Trme79305g00001 72 Pfam Pectinacetylesterase 1 72 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79305g00001 Trme-Chr79305 118 746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79305g00001 2 72 Carbohydrate Esterase AT3G05910 73.239 8.74e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79305g00001 K19882 - gmx:100791571 134.806