Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79160g00001 ATGTTGTCTTACCCTTCAACAATTGTGGGGCGTGACAAAGCAATGGTCTTAAACTTGGAACAAATAAAAGCTATCATTACTGCTCATGAGGTTCTTTTGCTCAATTCTAGAGATCCTTCTGTTATCCCTTTTGTTGATGAACTTCATGCAAGGATTCTTAATCACCACAGTATTGCTACTACTGATCATCCTCAGGAGGGTCAAAATGGGAAGGACAAAGGTGAAATAAAGAGAGATAGCAGCAACAATGTGAAGATTCTTCCGTTTGAATTTGTTGTATTGGAGGCATGCCTCGAAGCTGTTATTAGTTCCTTAGAAAATGAG 324 0.3889 MLSYPSTIVGRDKAMVLNLEQIKAIITAHEVLLLNSRDPSVIPFVDELHARILNHHSIATTDHPQEGQNGKDKGEIKRDSSNNVKILPFEFVVLEACLEAVISSLENE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79160g00001 108 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 108 IPR039204 -
Trme79160g00001 108 Gene3D Magnesium transport protein CorA, transmembrane region 39 108 - -
Trme79160g00001 108 Gene3D - 1 36 - -
Trme79160g00001 108 MobiDBLite consensus disorder prediction 56 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79160g00001 Trme-Chr79160 95 736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79160g00001 1 108 MRS2 Gene Family AT3G19640 50.735 8.47e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79160g00001 - - ccaj:109817554 128.642