Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7915g00001 ATGCCTAGACTCTTCCCCATCATTACCGATGTAGCCTCAGTTCTTGATCTATTCACTGTAGTTCCTGTGCTGATGACAGCCTACATCTGTCACTACAATGTTCATAACATAGATAATGAACTGGAGGATTCCTCACAGATGCGTGGGGTTGTGCGCGCTTCCCTTACTCTATGCTCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGCGAAGAAATTCTTGATGATGTGCTTGCCAANNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTGTTCTATGCAGTGAGGGTCAATATAGATGGTCTCATATTTTCCTCTTCAAGAAGGCCTTTGCTTGTTGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTTGGCACTATCTTCTTAGGAGCAAATTTCATACCTAACATTTGGGTAATTTTCCAGTTCGCTGGAGCAACAAGTTCTGTTTGTATAGCATTCATATTTCCAGCTGCAATCACTCTGAG 569 0.3919 MPRLFPIITDVASVLDLFTVVPVLMTAYICHYNVHNIDNELEDSSQMRGVVRASLTLCSSVYLLTSFFGFLLFGEEILDDVLAXXXXXXXXXXXXXLNDAVRFSYAAHLVLVFPVVFYAVRVNIDGLIFSSSRRPLLVDNFRFASITIALVGTIFLGANFIPNIWVIFQFAGATSSVCIAFIFPAAITL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7915g00001 189 Pfam Transmembrane amino acid transporter protein 14 187 IPR013057 -
Trme7915g00001 189 PANTHER AMINO ACID TRANSPORTER 16 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7915g00001 Trme-Chr7915 23 1820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7915g00001 1 189 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.434 1.27e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7915g00001 K14207 - gmx:100791286 282.722