Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79141g00001 ATGGGTATCCTTTATGGACATGATATTCTCATGGCTACTATGCTTAATGGAGCTGCAATTATGGATGGAGCTTTGCTACTCATTGCTGCTAATGAAAGCTGCCCGCAACCTCAAACCTCTGAGCATTTAGCTGCTGTGGAAATTATGCGTCTACAGCACATCATAATCCTTCAGAACAAGGTAGATCTGATTCAAGAAAATGTGGCAATCAATCAGCACGAAGCAATTCAGAAGTTTATCCAAGGAACTGTTGCTGATAGTGCACCAGTAGTACCTATTTCAGCACAATTGAAGTATAATATTGATGTCGTGTGTGAGTACATCGTGAAAAAGATCCCAATCCCTGAACGGAACTTCATTTCTCCACCTAATATGATAGTAATTCGGTCGTTTGATGTCAATAAACCTGGTTATGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAA 451 0.4035 MGILYGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGG 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79141g00001 150 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 116 IPR000795 GO:0003924|GO:0005525
Trme79141g00001 150 Gene3D Translation factors 118 150 - -
Trme79141g00001 150 Pfam Elongation factor Tu GTP binding domain 6 113 IPR000795 GO:0003924|GO:0005525
Trme79141g00001 150 SUPERFAMILY Translation proteins 117 150 IPR009000 -
Trme79141g00001 150 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 6 150 - -
Trme79141g00001 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 115 IPR027417 -
Trme79141g00001 150 Gene3D - 4 117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79141g00001 Trme-Chr79141 8 660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79141g00001 6 150 Eukaryotic Initiation Factors Gene Family AT1G04170 93.103 5.06e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79141g00001 K03242 - egr:104428565 284.263