Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79040g00001 GATGGGTTGAGCCTTCCTGATGCTAGATTGCGGTCAGTAAAGTCTACCACTGATGTTCTGACCCTCATGAAACTTGGCGAGGTTAATCGCGCTGTCAGTTCTACAGCAATCAACAATAGGAGTAGTCGTTCGCACAGTGTACTTACTGTGCATATCAATGGAAAAGATACATCTGGCAACTCCATTCGAAGTTGCCTTCATTTAGTAGACCTTGCTGGAAGCGAAAGAGTTGACAAGTCTGAAGTCACAGGAGATAGACTGAAGGAAGCACTATATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCACTGGCACAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTCACACTTCTTTTGCAGGACTCGTTAGGTGGACATGCTAAAACTTTGATGTTTGCACACGTGAGTCCCGAAGCAGATTCCTTTAGTGAAACGGTGAGTACTCTAAAATTTGCTCAGAGGGTTTCCACTGTTGAACTTGGTGCAGCCCGGATGAACAAAGAAAGCAGTGAAGTTATGCAACTTAAAGCACAG 552 0.4384 DGLSLPDARLRSVKSTTDVLTLMKLGEVNRAVSSTAINNRSSRSHSVLTVHINGKDTSGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEALYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFSETVSTLKFAQRVSTVELGAARMNKESSEVMQLKAQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79040g00001 184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 181 IPR027417 -
Trme79040g00001 184 SMART kinesin_4 1 172 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme79040g00001 184 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 182 IPR027640 GO:0003777|GO:0007018
Trme79040g00001 184 ProSiteProfiles Kinesin motor domain profile. 1 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme79040g00001 184 Pfam Kinesin motor domain 4 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme79040g00001 184 PRINTS Kinesin heavy chain signature 114 135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme79040g00001 184 PRINTS Kinesin heavy chain signature 35 52 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme79040g00001 184 PRINTS Kinesin heavy chain signature 65 83 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme79040g00001 184 Gene3D Kinesin motor domain 1 184 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79040g00001 Trme-Chr79040 13 777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79040g00001 22 164 Calmodulin-binding Proteins AT5G65930 54.861 1.98e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79040g00001 K10406 - gmx:100786642 330.487