Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79018g00001 GACTATACCGGAGAACAAGGCGTGATCTTTTGCGGTGTGTTCGATGGTCATGGTCCTCTAGGACACAAAGTTTCGCAATTTATCCGTGACAATCTACCCTCAAAACTATCTGAAGCAATCAAAATGGCACAACAGAAGTCGTCCATCAAATACTATGATGCCAATGATGCAGATACCGAAACTTTCCACGATGCCTACAATGATAGTAACCGCCATAACAACATATCCCTTGCTTCATGGGAAGGATGTTTTCTGAAATCCTTCGATGAAATGGATGATCATCTTGCTCAGGAAGTTAACACTGATAGCTATTGCAGTGGTTGCACAGCTGTAACTCTAATTAAACAGGTATAA 354 0.4153 DYTGEQGVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSEAIKMAQQKSSIKYYDANDADTETFHDAYNDSNRHNNISLASWEGCFLKSFDEMDDHLAQEVNTDSYCSGCTAVTLIKQV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79018g00001 117 SUPERFAMILY PP2C-like 5 114 IPR036457 -
Trme79018g00001 117 PANTHER PROTEIN PHOSPHATASE 8 115 IPR015655 GO:0004722|GO:0006470
Trme79018g00001 117 Gene3D - 1 116 IPR036457 -
Trme79018g00001 117 ProSiteProfiles PPM-type phosphatase domain profile. 1 117 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79018g00001 Trme-Chr79018 109 462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79018g00001 8 116 PP2C-type Phosphatase Gene Family AT1G03590 40.367 9.47e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79018g00001 - - mtr:11405988 203.756