Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme79008g00001 TCAATGAAAGGTAACATATGTTCAGTACCAAATGCTAGAGGCTTTCCCCAAGTCATGACTCTTGATCTTCGGTTTCAATTACGCCGTTCTGTCTCGGTAACCATACCCGAACCAGGGGAGATTTCAGAGTCGTCAAGTTCGAATTCATTATTCAGTGGTCTGCAAGTCTTGCTGGCCGACAATGACGATGTTAATAGGGCAGTGACACAAAAATTTCTTCGGAAACTAGGTTGTTCTGTTACATCTGTTTCTTCCGGATTCGAATGTCTTAGTCTTGTTGGACATGCTGGTGCATCTCCCTTTGAAGTTGTNCTTTTGGATCTTCACTTGCCTGATTTAGATGGATTTGAATTTACTGCGAGGATCCGGAAGTTTAAAAGCCGCAATTGGCCTATCGTCGTTGCTTTGACAGCAAGCTCCGAAGAAGATTTGTGGGAAAAATGTATGCATATTGGATTTAATGGAGTTATCCGAAAGCCGGTTTTGTTGGAAGGATTCGCAGCCGAACTCCGAAGAATCTTGAAGGGAAATTTGGCCCTGTTAGGATCTTCAAGTTATTAA 561 0.426 SMKGNICSVPNARGFPQVMTLDLRFQLRRSVSVTIPEPGEISESSSSNSLFSGLQVLLADNDDVNRAVTQKFLRKLGCSVTSVSSGFECLSLVGHAGASPFEVVLLDLHLPDLDGFEFTARIRKFKSRNWPIVVALTASSEEDLWEKCMHIGFNGVIRKPVLLEGFAAELRRILKGNLALLGSSSY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme79008g00001 186 Gene3D - 54 183 - -
Trme79008g00001 186 Pfam Response regulator receiver domain 56 162 IPR001789 GO:0000160
Trme79008g00001 186 SMART REC_2 54 170 IPR001789 GO:0000160
Trme79008g00001 186 SUPERFAMILY CheY-like 51 175 IPR011006 -
Trme79008g00001 186 ProSiteProfiles Response regulatory domain profile. 55 174 IPR001789 GO:0000160
Trme79008g00001 186 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme79008g00001 Trme-Chr79008 108 668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme79008g00001 2 175 Miscellaneous Gene Families AT3G04580 49.162 6.49e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme79008g00001 Response_reg 4.3e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme79008g00001 K14509 - gmx:100819626 240.736