Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme789g00002 ATGGATTCTAAGCTCATGACTTATAAGATGAAGCAAAATATTTGGCTCATGTTCATAAAACCTGGGAGCTTGAATGAGGTACCAAAGAACAAGAGGAAAGTTAAGTGTAGGAAGAATATGAGATGTGGTTATATAAGCACTGAAGAGAATACAAGTCCTGGTTCTCAGGATCAGACCTTAAGCAGTTGTTATTCAGAGAGGATGAATCCAATACAAAAAAGAAGAAAAAGAATAAATGAAAGGTTGAGAATCCTACCAAAACTTGTCCATAGTGGAACTAAGGTGGATATCAGCACCATGCTTGAGGAAGCTTCAAATATGTATTACACAATGTCTCAGGTAGTGACCTCACTTGGGTTCACTGTGATTCACCATGTAAAGATTCCACCAAGGAACTTCAATTATGGGAAGCAGAAAGCATCAGCACGCGGGGAGGGTAATATAGATTTTTGA 453 0.3841 MDSKLMTYKMKQNIWLMFIKPGSLNEVPKNKRKVKCRKNMRCGYISTEENTSPGSQDQTLSSCYSERMNPIQKRRKRINERLRILPKLVHSGTKVDISTMLEEASNMYYTMSQVVTSLGFTVIHHVKIPPRNFNYGKQKASARGEGNIDF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme789g00002 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 118 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme789g00002 71 104 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 82.353 2.11e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme789g00002 - - mtr:11440124 94.7449