Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78968g00001 ATGGTTCTAGCAAAGTTCCATGTAACAGGTGGTTCACCGAGATCAAGAGTTGCAACCTACAAAGTGTGTTGGTCGCCAACAGATGCTGAGAGTTGCTTTGGTGCTGATGTATTAGCTGCGATTGATCAAGCAATTAGTGATGGTGTTGATTTAATCTCAGTTTCTGCCGGAGGCGAAACTAGTACAAGTTCTGAAGCAATTTTCACTGATGAGGTTTCAATAG 223 0.426 MVLAKFHVTGGSPRSRVATYKVCWSPTDAESCFGADVLAAIDQAISDGVDLISVSAGGETSTSSEAIFTDEVSI 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78968g00001 74 SUPERFAMILY Subtilisin-like 7 62 IPR036852 GO:0004252|GO:0006508
Trme78968g00001 74 Gene3D Peptidase S8/S53 domain 5 64 IPR036852 GO:0004252|GO:0006508
Trme78968g00001 74 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 72 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78968g00001 Trme-Chr78968 22 649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78968g00001 10 74 Subtilisin-like Serine Gene Family AT2G04160 58.462 5.20e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78968g00001 - - gmx:100803751 106.301