Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme789662g00001 ATGAAGGTGGTAGTTTCCTACTTGCTTGCTCGCCATTCTTGGAGGCAACAATACCCCATCCACCAAAACCATCAAGGACATCCTTGGATCGGTTGGAACAGAGTAGAAGATGATAGGATTGAGTTGTTTTTGTCTGAAATTAAGGGCAATGATTTAGCTGAGGTTGTTGCATCTGATGAGGAAAAGTTGGCATCAGTGCCTTCTGGTTGTGGTGGTGTTGTTGCCGCTGCACCCGCAAGTGG 242 0.4669 MKVVVSYLLARHSWRQQYPIHQNHQGHPWIGWNRVEDDRIELFLSEIKGNDLAEVVASDEEKLASVPSGCGGVVAAAPASG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme789662g00001 81 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 34 79 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme789662g00001 Trme-Chr789662 1 242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme789662g00001 1 71 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 47.887 1.55e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme789662g00001 K02943 - dcr:108210460 66.6254