Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78901g00001 ATGAGGCTTAAAGATGAGAATGGAAAGACTTATTCAGATAAGTTCTTGAGGGATATATGTAATCATGAAGTGGAGGARAAAMTAGTAGAAGAGATTTRCAGRGTTGTGAGTCAGAGGGAGGATATTAATAARGAAGTGTTCAATGATTCTTTGARMTTTAGGCCTGAGGAGATAAAGAAGATGGATTATTTGCATGCTGCCCTTTCAGAAACTCTTAGATTGTATCCATCTGTGCCTATGGATCATAAGGAG 252 0.3571 MRLKDENGKTYSDKFLRDICNHEVEEKJVEEIXRVVSQREDINKEVFNDSLXFRPEEIKKMDYLHAALSETLRLYPSVPMDHKE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78901g00001 84 SUPERFAMILY Cytochrome P450 4 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme78901g00001 84 Gene3D Cytochrome P450 17 84 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme78901g00001 84 PANTHER CYTOCHROME P450 18 84 - -
Trme78901g00001 84 Pfam Cytochrome P450 21 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78901g00001 Trme-Chr78901 305 628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78901g00001 1 84 Cytochrome P450 AT5G23190 49.541 1.26e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78901g00001 K15402 - gmx:100809503 114.775