Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme788534g00001 ACCGAAACGAGGTCGTTTCTCCGCGGAATAGACGCAAACTCGCCGCATCCATCAGCTCCGGCGGCGGCGGCGGCGGCGTTCGAAGAGGAGAACGGAGTTTCATCGCCAAACAGCACAGTATCAAGTATCAGTGGAAAGAGAAGCGAAAGAGAAGGTAATGGAGATGAAAACGACGCCGTTGAGAGAGCTTCATGTTCTCGCGGTGGTGGAAGTGATGATGATGACGGCGGAGGTTGCGGC 240 0.5583 TETRSFLRGIDANSPHPSAPAAAAAAFEEENGVSSPNSTVSSISGKRSEREGNGDENDAVERASCSRGGGSDDDDGGGCG 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme788534g00001 80 MobiDBLite consensus disorder prediction 31 47 - -
Trme788534g00001 80 MobiDBLite consensus disorder prediction 48 62 - -
Trme788534g00001 80 MobiDBLite consensus disorder prediction 1 80 - -
Trme788534g00001 80 Pfam HD-ZIP protein N terminus 2 51 IPR006712 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme788534g00001 Trme-Chr788534 1 240 Singletons
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme788534g00001 1 80 Homeobox Transcription Factor Family AT3G60390 53.846 1.53e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme788534g00001 K09338 - tcc:18606217 68.1662