Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78846g00001 CCAAGGTTGAGGGAAGAGCTAAAGAAGAATTATTGGATTGTTGACAATGGTTACAATTCATTTCCAACTCAAATTCCTGGTGAAGGTGGAGAAATGTTATGTGATGATGAAATTGGAGATAACATTATTGGAGTTCTTTTTGCTGCTCAGGATACCACAGCTACTGTCATGACTTGGGTGGTCAAGTACTTGCATGATGAACCTAAACTTCTTGAATGTGTAAAGGTATGA 231 0.381 PRLREELKKNYWIVDNGYNSFPTQIPGEGGEMLCDDEIGDNIIGVLFAAQDTTATVMTWVVKYLHDEPKLLECVKV 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78846g00001 76 SUPERFAMILY Cytochrome P450 27 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme78846g00001 76 Gene3D Cytochrome P450 12 75 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78846g00001 Trme-Chr78846 80 537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78846g00001 4 75 Cytochrome P450 AT3G19270 41.739 1.19e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78846g00001 K09843 - gmx:100779978 116.701