Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78844g00001 ATGCATCAGTTGCTTCGCGAATGGAAGGCGGAACTGGAGTCTCCAGCTACCTCCTTAGCTGATGGGAGCCTTGGTTCGTTTACCGGGGAACTAGCCCAACTGTTGCAAGAAATTGAGGAGAAAGATGATGCAACAAGTCCATTTACAAGCCCTGTGCCACTGAAGACTGGTCTCCATCAAAATAACATTAGTGATGGCAATTATCCATTTTTTCAGGAG 219 0.4658 MHQLLREWKAELESPATSLADGSLGSFTGELAQLLQEIEEKDDATSPFTSPVPLKTGLHQNNISDGNYPFFQE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78844g00001 73 MobiDBLite consensus disorder prediction 49 73 - -
Trme78844g00001 73 PANTHER TRANSCRIPTION FACTOR VOZ1 1 63 IPR039277 GO:0006355|GO:0048578
Trme78844g00001 73 MobiDBLite consensus disorder prediction 41 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78844g00001 Trme-Chr78844 338 677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78844g00001 1 53 VOZ-9 Transcription Factor Family AT1G28520 51.786 1.16e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78844g00001 - - psat:127101646 131.724