Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7874g00001 ATGGCCACCTTCATTTTAAGGTCTAATAAACTAGTCCATGCATTGGGCTGGTTTTGTGTCATGCTAATGATTCATAAGAGTGCTGCCTATGATTTCATAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAGGTGATTCCAATTCCAGTCCTTTCAATCAATGGGCAGACAAGAGCCGTTTTCAAATAGGAGACTCCCTAGTGTTCAACTACCAATCTGGCAAAGACTCRGTGCTTTATGTGAAGAGTGAAGACTATGCAAGTTGCAACACTGGTTCACCTAWTGCAAAATTCTCTGATGGTCACACAGTCTTCAAACTGAACCAATCAGGACCTCATTTCTTCATCAGTGGAAACAAAGACAACTGTCTCAAAAATGAGAAGCTAACAGTTATTGTTCTGTCCGACAGGAGCAACAGCAACACCAACCAAACAAGCAATGCTTCTCCACCTTCACCACAATCGTCATCATCATCACCTCCTTCACCAGCACCTTCTAAACAAGAGGGTCAATCTCCACCTCCAGACACAAACCAAACACCACCTCCTACTACTGCCAGTGATCGCGRTCATCCTCCTCATAATGGTGCTGCTTCGGTCTTTGTCAGCCTAGCTGGGTCTATTGGAACATTCATGGTTTCAGTTCTAATTTTATCTAAATATGTATGA 666 0.4324 MATFILRSNKLVHALGWFCVMLMIHKSAAYDFIVGGQKGWSVPGDSNSSPFNQWADKSRFQIGDSLVFNYQSGKDSVLYVKSEDYASCNTGSPXAKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKLTVIVLSDRSNSNTNQTSNASPPSPQSSSSSPPSPAPSKQEGQSPPPDTNQTPPPTTASDRXHPPHNGAASVFVSLAGSIGTFMVSVLILSKYV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7874g00001 221 CDD OsENODL1_like 30 133 IPR041846 -
Trme7874g00001 221 MobiDBLite consensus disorder prediction 134 196 - -
Trme7874g00001 221 MobiDBLite consensus disorder prediction 153 180 - -
Trme7874g00001 221 FunFam Early nodulin-like protein 9 30 144 - -
Trme7874g00001 221 Gene3D - 30 146 IPR008972 -
Trme7874g00001 221 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Trme7874g00001 221 Pfam Plastocyanin-like domain 45 124 IPR003245 GO:0009055
Trme7874g00001 221 PANTHER BLUE COPPER PROTEIN 29 152 IPR039391 GO:0009055
Trme7874g00001 221 MobiDBLite consensus disorder prediction 134 152 - -
Trme7874g00001 221 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7874g00001 Trme-Chr7874 442 1285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7874g00001 11 199 Phytocyanin Superfamily AT3G20570 48.677 1.28e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7874g00001 - - gmx:100792916 301.597