Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78749g00001 ATGGCGCAAGGAACAGGACGGAGTAGTAGAATTGTTGGAGATTATGTAGTTGGGAAGCAAATTGGAGCAGGTTCGTTTTCAGTTGTGTGGCATGCGAGACACAAAGTTCATGGAACAGAAGTTGCTATCAAAGAAATCGCAACTCTTAGACTTAATAAGAAGTTGCAAGAGAGTCTTATGTCTGAGATTTTCATCTTGAAGCGTATTAATCATCCTAATATTATCTCTTTGCATGATATTATTCAG 246 0.3821 MAQGTGRSSRIVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIIQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78749g00001 82 SUPERFAMILY Protein kinase-like (PK-like) 10 81 IPR011009 -
Trme78749g00001 82 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 7 82 IPR045269 GO:0004674|GO:0006914
Trme78749g00001 82 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Trme78749g00001 82 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Trme78749g00001 82 Pfam Protein kinase domain 15 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme78749g00001 82 ProSiteProfiles Protein kinase domain profile. 15 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78749g00001 1 81 CBL-interacting serine-threonine protein kinases AT2G30360 36.905 1.02e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Trme78749g00001 Pkinase 1.2e-13 CL0016