Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78718g00001 GCAATGGCATTTGATGCTGAGTACGCACGATGGTTAGAAGAGCACAATAGGCAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGGGATATTGAACTCCGTACCATTGTCGACAATTTCATGACTCAATTTGAAGATATTTACAGGCTGAAAGGTGTTGCAGCTAAAGCTGATGTTTTCCACATTCTATCTGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCCGAACTTCTTAAGCTTCTAGTAAGTCATTTGGAGCCTTTAACTGAGCAACAATTGATGGGAATCTACAACTTGCAACAGTCATCCCAACAAGCTGAAGATGCTCTCTCCCAAGGAATGGATGCATTGCAGCAATCACTTTCCGAGACATTAGCTAATGGTTCACCTAACCCATCAGGTTCATCTGGAAATGTGGCAAACTACATGGGCCAAATGGCTATGGCCATGGGAAAACTCGGTACTCTCGAGGGGTTTCTTCGCCAGGTA 522 0.4483 AMAFDAEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVSHLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANGSPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78718g00001 174 ProSiteProfiles DOG1 domain profile. 1 174 IPR025422 GO:0006351|GO:0043565
Trme78718g00001 174 PANTHER TRANSCRIPTION FACTOR TGA9 1 173 - -
Trme78718g00001 174 Pfam Seed dormancy control 18 94 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78718g00001 Trme-Chr78718 137 779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78718g00001 1 174 bZIP Transcription Factor Family AT5G06950 72.414 1.56e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78718g00001 K14431 - gmx:778136 314.694