Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7864g00001 AAAACACTTTCTTCATGCACCAATAACAACAATAACTCTATCAACACATTCTCATTCGATGATGACGACGAAAAGCCTCGTGAAGAATGCGGCGTTGTTGGAATCTACGGCGATCCAGAAGCTTCTCGTCTCTCTTATCTCGCTCTCCACGCTCTTCAACACCGTGGTCAAGAAGGTGCTGGTATCGTAGCCGTCAACAATAATAACGTCCTTCAAACCATTACCGGCGTTGGTCTTGTTTCCGAAGTTTTCAATGACACCAAACTCCGTCAATTACCGGGAACCTTAGCCATCGGTCATGTCCGTTACTCAACCGCAGGTCAATCCCATCTCAAAAACGTTCAACCGTTTGTTGCAGGTTACAGGTTTGGTTCAGTTGGTGTTGCTCACAATGGAAATTTCGTCAATTACCGTTCTTTAAGAAATGAACTTGAAGAATCTGGTTCAATTTTCAACACTACTTCTGATACTGAAGTTTTACTTCATCTTATTGCAACTTCAAATCATAGACCTTTTATAGCTAGAGTTATTGATGCTTGTGAAAAAGTTAAAGGTGCTTATTCAATTGTTTTTATTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTACGGTTTTCGACCTTTGGTTATGGGAAGAAGAAGTAATGGTTCTATTGTTTTTGCTTCTGAAACATGTGCTCTTGATTTGATTGAAGCTACTTATGAAAGAGAGGTTTATCCTGGTGAAGTTTTGGTTGTGGATAAAAATGGTGTTCAATCTCATTGTCTTGTTTCTCATCCAGAACCAAAACAATGTATTTTTGAACATATTTATTTTTCACTGCCAAATTCTGTTGTTTTTGGGAAATCTGTTTATGAATCAAGAAGATTGTTTGGTGAAATATTGGCTACTGAGAGTTCTGTTGATTGTGATGTTGTTATAGCTGTTCCTGATTCTGGTGTTGTAGCTGCACTTGGTTATGCTGCAAAAGCTGGTGTTCCTTTTCAACAAGGGTTGATTAGGTCACACTATGTTGGTAGAACTTTCATTGAGCCATCACAGAAGATTAGAGATTTTGGTGTGAAATTGAAGCTTTCGCCGGTTCGCGCTGTTCTTGAAGGGAAAAGAGTTGTGGTTGTTGATGATTCAATTGTGAGAGGAACAACATCATCTAAAATTGTGAGGCTGTTAAAAGAAGCTGGTGCTAAAGAAGTTCATATGAGAATTGCATGTCCACCAATTATTGGGTCTTGTTATTATGGTGTGGATACACCTAGCTCAAAAGAGTTGATATCTAATAGGATGAGTGTGGAAGAGATAAAAGAGTTTATTGGTTGTGATTCACTTGCTTTTCTACCTCTTGATAGTTTGAAGAAATTGTTGGCTAATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAAATATCCTGTTGAACCTAATGATGGTCCGTTTGATTTGAAGGAAGGAAAGAAGGAAAATACGAAACCGATGAATGAGATGGAGATTGTTGGAATTTGA 1506 0.3811 KTLSSCTNNNNNSINTFSFDDDDEKPREECGVVGIYGDPEASRLSYLALHALQHRGQEGAGIVAVNNNNVLQTITGVGLVSEVFNDTKLRQLPGTLAIGHVRYSTAGQSHLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNELEESGSIFNTTSDTEVLLHLIATSNHRPFIARVIDACEKVKGAYSIVFITEDKLVAVRDPYGFRPLVMGRRSNGSIVFASETCALDLIEATYEREVYPGEVLVVDKNGVQSHCLVSHPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILATESSVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSSKELISNRMSVEEIKEFIGCDSLAFLPLDSLKKLLANDSSNFCYACFTGKYPVEPNDGPFDLKEGKKENTKPMNEMEIVGI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7864g00001 501 Gene3D - 290 454 IPR029057 -
Trme7864g00001 501 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 30 472 IPR029055 -
Trme7864g00001 501 NCBIfam amidophosphoribosyltransferase 30 472 IPR005854 GO:0004044|GO:0009113
Trme7864g00001 501 Pfam Glutamine amidotransferase domain 111 228 IPR017932 -
Trme7864g00001 501 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 28 477 - -
Trme7864g00001 501 Hamap Amidophosphoribosyltransferase [purF]. 29 471 IPR005854 GO:0004044|GO:0009113
Trme7864g00001 501 SUPERFAMILY PRTase-like 266 478 IPR029057 -
Trme7864g00001 501 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 30 266 IPR029055 -
Trme7864g00001 501 CDD PRTases_typeI 288 404 IPR000836 -
Trme7864g00001 501 PIRSF Pur1 26 484 IPR005854 GO:0004044|GO:0009113
Trme7864g00001 501 Pfam Phosphoribosyl transferase domain 289 401 IPR000836 -
Trme7864g00001 501 CDD GPATase_N 30 281 IPR035584 -
Trme7864g00001 501 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 30 250 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7864g00001 Trme-Chr7864 354 1859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7864g00001 11 477 PRT Gene Family AT2G16570 83.369 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7864g00001 K00764 - pop:7494291 813.913