Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78514g00001 GAGAATAACATCCTTATTCGTTTCCCTTTTCAATTAGAAGATGAAGGTGATCGATATCCTTATTGTGGCTATCCTGGTTTCAGCTTAACTTGTACTAATGATAGCAAAACAGTTCTAACACTTCCTTATTCAGGAGCTTTCTATGTTCGCAGAATTGATTATCTCGGACACCACATACAAGTCTATGATCCTCATCATTGCCTTCCAAATCGTCTTCTAAGCCTCAACCTTTCAGGTTCACCTTTCGTTACCGAATTTCTTACTAATTACACTCTCTTGAGTTGCTCAACTCCGAACCTAGGATCGCAATTCACACCCGTTGATTGTCTTAGCAATTCTACACATTTTGTATCAGCTATTCCTTCATTGAGCTTCACCAATTCATTGCCTCAGTCTTGCCATGTTATTAGAAATATCTCAGTTCCAGTTACAACATCATATCAGGAAATTTTCAGTGAAGATCTTCAACTAACATGGTCTTCACCTGATTGTAGATATTGTGAATTACTAGATAGCATGTGTGGATTTGAGAGCAGAAATAGTAATCATGTTCATTGTTTCCCTAGTCACCAAACGGGTAACTATTGA 588 0.3776 ENNILIRFPFQLEDEGDRYPYCGYPGFSLTCTNDSKTVLTLPYSGAFYVRRIDYLGHHIQVYDPHHCLPNRLLSLNLSGSPFVTEFLTNYTLLSCSTPNLGSQFTPVDCLSNSTHFVSAIPSLSFTNSLPQSCHVIRNISVPVTTSYQEIFSEDLQLTWSSPDCRYCELLDSMCGFESRNSNHVHCFPSHQTGNY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78514g00001 195 Pfam Wall-associated receptor kinase galacturonan-binding 3 63 IPR025287 GO:0030247
Trme78514g00001 195 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 189 IPR046948 -
Trme78514g00001 195 Pfam Wall-associated receptor kinase C-terminal 142 188 IPR032872 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78514g00001 1 188 C3H Transcription Factor Family AT2G46495 40.201 1.73e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78514g00001 - - tpra:123889576 395.201