Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78484g00001 GGTTGTGATGCATCAATTTTGCTTGAATCTCCAACAAGTCAAGCAGAGAAAAATCATCCTGATGACATTTCATTAGCTGGGGATGGCTTTGACACAGTGATTAAAGCAAAAGAAGCTATTGACAATGATTCTCAATGTAGAAATAAAGTCTCTTGTGCAGATATACTTGCTCTTGCTACAAGGGATGTAGTCAATTTGGTATATGCATGCCTTTACTTCTAG 222 0.3739 GCDASILLESPTSQAEKNHPDDISLAGDGFDTVIKAKEAIDNDSQCRNKVSCADILALATRDVVNLVYACLYF 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78484g00001 73 PANTHER - 1 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme78484g00001 73 Pfam Peroxidase 1 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme78484g00001 73 SUPERFAMILY Heme-dependent peroxidases 1 67 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme78484g00001 73 ProSiteProfiles Plant heme peroxidase family profile. 1 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme78484g00001 73 Gene3D - 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78484g00001 Trme-Chr78484 241 462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78484g00001 1 67 Peroxidase AT2G18980 77.612 8.51e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78484g00001 K00430 - gmx:100808542 120.553