Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7845g00001 GATTATGTTCGGATGCATTTTAGAGCCCCATTCCAGTGGGAAATAACAGTTTCTTCTGCAATTGCTAAGGGTAGAAACTGTCTCTTATACACATCTCCGANCCCATTCCAGTGGGAAATAACAGTTTCTTCTGCAATTGCTAAGGGTAGAAATGTGCTGAATTTTCCGAGAGATTATACAAGACATTGCTTAAAGAAGTCTGATATCAACATTTATCTCTTGGATAATGCAACTGGAAAAGTTTTCAAATCCCCGATTTTTACTTCATCTGCAAATGATGAAGACCGTTTTATTTACTCGGGTTGGAAGAAGTTCGTGAAAGAGAAGAAACTCAAGTTTAGGGATAAACTTATCTTTAGATCTCAAGCGGGGAATAACATATTAGATATCCAGATAATACGTAGAGGTTGTTCCCGTTAA 420 0.3714 DYVRMHFRAPFQWEITVSSAIAKGRNCLLYTSPXPFQWEITVSSAIAKGRNVLNFPRDYTRHCLKKSDINIYLLDNATGKVFKSPIFTSSANDEDRFIYSGWKKFVKEKKLKFRDKLIFRSQAGNNILDIQIIRRGCSR 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7845g00001 139 SMART B3_2 36 136 IPR003340 GO:0003677
Trme7845g00001 139 Gene3D - 20 136 IPR015300 -
Trme7845g00001 139 SUPERFAMILY DNA-binding pseudobarrel domain 37 136 IPR015300 -
Trme7845g00001 139 Pfam B3 DNA binding domain 50 134 IPR003340 GO:0003677
Trme7845g00001 139 ProSiteProfiles B3 DNA-binding domain profile. 38 136 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trme7845g00001 B3 4.4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7845g00001 - K20553 tpra:123885964 128.257