Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7843g00001 AAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATATTATTTTGATGATGGCACTCTTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTTTCTGTCCCGTTTGAACTCTTCGCCCCCTCTGCATATGAGTGCCGTGACCTTTCTTGCAGGGATTCTACAACAATAGGACTGATAAAAACGGGTCCTACTTACCCTTTTGGATTGGATCCTGTATGGCATGGTACACGTAGTGAATTACCATTCCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAGGTTCTTCAAGAACAGCGTAAATGTATGTCTATTCGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACGGGTTCTCAAGCTGATTTGTACCACGTAATGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGTGAGAACCAACTCTTTGCGGGTCAGAAAAATCTTCAGCTCGTGCTTTTGCTTCTGGCCGGTGTTGCTGTGCCCTGGATGCTGTTGCCAAAACCCTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGATGAATCCTATGCACCACTTCCAAACACGGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCATGAGGAGTTTGAGTTCAGTGAAATTTTTGTACATCAACTCATCCACACCATAGAATTTGTACTTGGAGCAGTATCTAATACAGCATCTTACCTTCGTCTGTGGGCCCTTAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGATGATGGCATGGGGGTATGTTGA 849 0.4287 KLDDITEMTFGGRYIILMMALFSIYTGFIYNEFFSVPFELFAPSAYECRDLSCRDSTTIGLIKTGPTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNARFFKNSVNVCLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFAGQKNLQLVLLLLAGVAVPWMLLPKPFILKKQHEARHGDESYAPLPNTEESLQVESNHDSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALRVIKCILREGSDDGMGVC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7843g00001 282 PANTHER VACUOLAR PROTON ATPASES 1 267 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trme7843g00001 282 Pfam V-type ATPase 116kDa subunit family 2 264 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7843g00001 Trme-Chr7843 335 1860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7843g00001 1 264 Primary Pumps ATPases(2) AT2G21410 77.899 6.98e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7843g00001 K02154 - gmx:100783125 468.388