Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78433g00001 ATGACTAGAAGATGGTCCTTTTACATGGATTTTCTRCCAATTGTGGTAATTGTAAGCAATGAATTCAGTGATGTGGCTTTACTCACTTTATACAAAGCAGCCACACTTCAAGGGTTGAACAATCATGTCTTTGTTGCCTATGCTTATGTTGTTGGTACTTCTGTTCTAATTCCTATCACTTTTATTAGTAGAGGATCAAGAGTGGTTCCTCCTCTAAATTTCTCCATAATATGCAAAATTGTGCTTCTTGGGGCAATAGG 260 0.3692 MTRRWSFYMDFLPIVVIVSNEFSDVALLTLYKAATLQGLNNHVFVAYAYVVGTSVLIPITFISRGSRVVPPLNFSIICKIVLLGAIG 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78433g00001 87 PANTHER WAT1-RELATED PROTEIN 12 87 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78433g00001 Trme-Chr78433 172 603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78433g00001 1 87 Nodulin-like Gene Family AT3G28050 48.276 1.14e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78433g00001 - - tpra:123906528 138.658