Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78271g00001 ATGAACAATTTTCCTCAAAGAAATTACACACAATCTAGAATCAAAGCTGAGGGAGGTGAACCACTTCGAATTGAACTGCGCGATGCTGAAAATCAGCACTTAGTGAGGGATGAGGGTTCATCAAGGAAGATCCAAATCTGTGTCTTACATGGTGACTTTAGAAAAGAAGATTGGACTTCTGAGGAATTTGATAAGCAAATTGTAATTCCAAGAGAGGGAAAAGGACCACTGCTGAAAGGAGATACAGTCATTACACTAAAAGATGGAGTTGCTTACATCAACAACATGGAGATTACTGATATATCTAAGGGAAGAACCAAACAAGTTCGGTTAGGGGCTAAAATAGTCCGATCTAATTCAATTGGATCGGATATTAGGGAAGGTAGAAGCGAACCTTTTAGGGTCTGGCATTATCGAGTAAAGGGTAAGTACTAA 435 0.3931 MNNFPQRNYTQSRIKAEGGEPLRIELRDAENQHLVRDEGSSRKIQICVLHGDFRKEDWTSEEFDKQIVIPREGKGPLLKGDTVITLKDGVAYINNMEITDISKGRTKQVRLGAKIVRSNSIGSDIREGRSEPFRVWHYRVKGKY 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78271g00001 144 PANTHER OS02G0177800 PROTEIN 2 139 IPR012416 GO:0005516
Trme78271g00001 144 Pfam Calmodulin binding protein-like N-terminal domain 2 135 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78271g00001 Trme-Chr78271 84 518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78271g00001 1 133 Calmodulin-binding Proteins AT5G26920 41.176 3.69e-23 91.7