Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78176g00001 ATGGCTTCCGAAGAAGGAAGTGTCGTTAATCTTTCTCAACAAGTTGTATCGATGATGTTTTCAATCACTTCTAGGGCAGTATTTGGAAAAAAATACATGGAGCAAGATGAGTTCATAGCGCAAGTAAGGGAAGTGATGCAGCTATCCAGTGGTTTCTACATTGGAGACTTGTTTCCTTCGGCGAAATGGCTTCAAAACTTTACTGGAATGAGGTCTAAGCTTGAGAAGGTGCATCAAAATATTGATAGAATACTTGAGATGATTATCGATGATCATAAAGAAACAAAGTCAAGAACTAAAGATTGTTTAGTTGAAGGAGAGGAAGATTTGATTGATGTTCTCTTGAAATTTGAAGATGGTAGCAGCTGCAATCAGGAACTTTCATTAACAAAAAGAAATATCAAGGCTATACTCTTT 417 0.3645 MASEEGSVVNLSQQVVSMMFSITSRAVFGKKYMEQDEFIAQVREVMQLSSGFYIGDLFPSAKWLQNFTGMRSKLEKVHQNIDRILEMIIDDHKETKSRTKDCLVEGEEDLIDVLLKFEDGSSCNQELSLTKRNIKAILF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78176g00001 139 SUPERFAMILY Cytochrome P450 4 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme78176g00001 139 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 139 - -
Trme78176g00001 139 Gene3D Cytochrome P450 1 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme78176g00001 139 Pfam Cytochrome P450 5 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78176g00001 Trme-Chr78176 246 662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78176g00001 2 138 Cytochrome P450 AT5G57260 30.282 6.06e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78176g00001 - - lja:Lj6g3v0779840.2 165.236