Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78167g00001 ATGCCTGCCCATGATAACATTTCATTAGTCTCCGGTGCCGACCAAACCGTGTGTGTCACAGGTGCCGGCGGGTTCATAGCTTCCTGGCTTGTTAAACTTCTCTTGGAGAAAGGCTACACCGTTAAAGGAACCGTCCGAAACCCGGGTATGCATGTTATCATTGTTATTTGA 171 0.4854 MPAHDNISLVSGADQTVCVTGAGGFIASWLVKLLLEKGYTVKGTVRNPGMHVIIVI 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78167g00001 56 Gene3D - 6 52 - -
Trme78167g00001 56 Pfam NAD dependent epimerase/dehydratase family 17 47 IPR001509 -
Trme78167g00001 56 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 49 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78167g00001 Trme-Chr78167 490 660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78167g00001 9 48 Monolignol Biosynthesis Gene Families AT1G80820 77.500 5.61e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78167g00001 K09753 - atri:130806397 81.6481