Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7810g00001 ATGGCTTGTGAAACTAGAATGGCTTCTAGTGTTATGATGGGAAAGTTTAAAGGTGTGTTTGAGGGATTGGAATCATTGGTTGATGTTGGTGGAGGCATAGGGACAATTACTAAGGTTATTGCTAAGTCATTCCCAAACATTGAATGCATTGTGTTTGATCTCCCACATGTTGTTGATGGTTTGCAAGGAAGTGAAAACTTGAAATATGTTGGAGGTGACATGTTTGAGGCTATTCCTCCTACTCAATCAATTTTACTCAAGGGTGTATTACATGATTGGAACGATGAGGAATGTTTGAAAATTCTAAAGAAATGCAAGGAAGCAATAGGGAGCAAAGGAAAAGAAGGGAAAGTGATAATCATAGATGTAGTGTTGGGGAATGAGAAGGAAGACAAAGAATCATTTGAAGCACAATTGTTCTATGATTTGGAGATGATGGTGTTAGTCAATGGAAAAGAGAGAAATGAGAAAGAATGGTCTAAGCTGTTTTTCTCTACTGGTTTTAGTAACTACAAGATAACTTATGGTCTTGGTTTTAAGTCTCTCATTGAAGTTTTTCCTTAG 564 0.367 MACETRMASSVMMGKFKGVFEGLESLVDVGGGIGTITKVIAKSFPNIECIVFDLPHVVDGLQGSENLKYVGGDMFEAIPPTQSILLKGVLHDWNDEECLKILKKCKEAIGSKGKEGKVIIIDVVLGNEKEDKESFEAQLFYDLEMMVLVNGKERNEKEWSKLFFSTGFSNYKITYGLGFKSLIEVFP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7810g00001 187 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 187 IPR016461 GO:0008168
Trme7810g00001 187 CDD AdoMet_MTases 26 126 - -
Trme7810g00001 187 Pfam O-methyltransferase domain 7 169 IPR001077 GO:0008171
Trme7810g00001 187 FunFam O-methyltransferase ZRP4 1 187 - -
Trme7810g00001 187 PANTHER O-METHYLTRANSFERASE 1 172 IPR016461 GO:0008168
Trme7810g00001 187 Gene3D Vaccinia Virus protein VP39 1 187 IPR029063 -
Trme7810g00001 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 185 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7810g00001 Trme-Chr7810 85 1776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7810g00001 20 187 Monolignol Biosynthesis Gene Families AT1G51990 41.176 1.28e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7810g00001 - K16040 gmx:100807238 256.529