Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme78065g00001 AAGCTTGCTCCAACTATTGGCATTGCTGTCGATCATCGCCGTAAGAACCGATCTTTAGAAGGTCTACAAGCCAATGTGCAGAGGCTGAAGACATACAAGGCCAAGTTGGTTGTATTCCCAAGACGTGCACGCAAGGTCAAGGCTGGTGATTCTACTCCTGAGGAACTTGCAAATGCCACACAG 183 0.4863 KLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKVKAGDSTPEELANATQ 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme78065g00001 61 PANTHER 60S RIBOSOMAL PROTEIN L13 1 61 IPR001380 GO:0003735|GO:0005840|GO:0006412
Trme78065g00001 61 Pfam Ribosomal protein L13e 1 61 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme78065g00001 Trme-Chr78065 25 330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme78065g00001 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 95.082 7.13e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme78065g00001 K02873 - han:110873063 117.857