Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77974g00001 ATGGAATGTTCAAGCAGAGCTTGTACACTGCAGATGGGCAATGTTAGGTGCAGCAGGAATTTTCATTCCAGAATTCCTAACAAAGCTTGGTATCTTGAACACACCTTCATGCTCACAGGAACTGATGTAGGGTACCCTGGTGGACTTTGGTTTGATCCACTTGGTTGGGGAAGTGGTTCTCCTCAGAAGCTTAAGGAGTTGAGAACTAAGGAAATTAAGAATGGAAGATTGGCTATGTTGGCTGTTATGGGAGCTTGGTTCCAGCACATTTACACTGGCACTGGTCCTATTGATAACCTCTTTGCTCACCTTGCTGATCCTGGTCATGCTACTATTTTCGCTGTAAGTTCCACCAACACCACCTAG 366 0.4508 MECSSRACTLQMGNVRCSRNFHSRIPNKAWYLEHTFMLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAVSSTNTT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77974g00001 121 Gene3D Chlorophyll a/b binding protein domain 7 121 - -
Trme77974g00001 121 SUPERFAMILY Chlorophyll a-b binding protein 36 115 - -
Trme77974g00001 121 Pfam Chlorophyll A-B binding protein 33 89 IPR022796 -
Trme77974g00001 121 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 40 116 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77974g00001 Trme-Chr77974 237 753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77974g00001 38 114 Chloroplast and Mitochondria Gene Families AT3G61470 98.701 1.56e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77974g00001 K08908 - ini:109175692 168.703