Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme77947g00001 | ATGATGATGACATCTGGAGAAGCTGTCAAGTACAAGAGCTCCTTGGATGCATTCAAACAAATCCTCAAGAATGAGGGTGCCAAGTCATTGTTTAAGGGAGCTGGTGCTAACATTCTCCGTGCTGTTGCTGGTGCTGGTGTGCTCGCTGGTTATGACAAGTTGCAGGTTATTGTGTTCGGCAAGAAATATGGATCTGGTGGTGCTTAA | 207 | 0.4589 | MMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme77947g00001 | 68 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 1 | 57 | IPR018108 | - | |
| Trme77947g00001 | 68 | SUPERFAMILY | Mitochondrial carrier | 3 | 53 | IPR023395 | - | |
| Trme77947g00001 | 68 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 1 | 67 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Trme77947g00001 | 68 | Pfam | Mitochondrial carrier protein | 4 | 58 | IPR018108 | - | |
| Trme77947g00001 | 68 | Gene3D | Mitochondrial carrier domain | 1 | 64 | IPR023395 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme77947g00001 | 1 | 68 | Antiporters | AT3G08580 | 97.059 | 4.96e-39 | 130 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme77947g00001 | K05863 | - | qsa:O6P43_000133 | 124.02 |