Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77909g00001 ATGGCGCATAACGAATCAAAATCCGATCAAAATTCTGAAACCCGATTCTACAATCCATACAAAGACCTCGAAGTTCCTATCCGAAATCTCTACCAACTCCCAACCTCTCCGGAGTTTCTCTTCGACGAAGAAGCTCGCCGTAAACGCCGTTCTTGGGGCGAAAATCTAACCTTCTACACTGGCTGCAGTTACCTCGCCGGTTCAATCGCCGGTGCCGGAGTCGGACTCGTTGACGGTGTTCGATCTTTCGAGTCCGGCGACACCATGAAGCTTCGGGTTAATCGGATTCTTAACTCGTCCGGACATGCTGGTCGGACATGGGGAAACCGTGCTGGGATCATTGGGTTGCTTTACGCTGGAATTGAGAGTGGGATTGAAGCTGTGAGGGATACTGATGATGCCTGGAATAGTGTTGCGGCGGGGCTTGGGACCGGTGCACTTTATCGAGCGGCGAGAGGGGTGAGATCGGCTGCGGTGGCTGGTGCTGTTGGTGGTGTTCTTGTTGGAGCTGCTGTGACTGCTAAGCAGGTGTTGAAAAGATATGTGCCTATATGA 555 0.5225 MAHNESKSDQNSETRFYNPYKDLEVPIRNLYQLPTSPEFLFDEEARRKRRSWGENLTFYTGCSYLAGSIAGAGVGLVDGVRSFESGDTMKLRVNRILNSSGHAGRTWGNRAGIIGLLYAGIESGIEAVRDTDDAWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGAAVTAKQVLKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77909g00001 184 PANTHER TIM23 23 179 IPR045238 GO:0022857
Trme77909g00001 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77909g00001 Trme-Chr77909 227 781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77909g00001 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 69.892 2.08e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77909g00001 K17794 - gmx:100813158 281.182