Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77803g00001 TACAAAGGAGGTGTTAATTTGGTTTCTGATGGTTATAGCAAAGGCACTGCTTTAGGTGCTGAGATTATTGGTACCTTTGTTTTGGTCTACACTGTTTTCTCTGCCACTGACCCTAAGAGAAGTGCTAGGGATTCTCATGTTCCT 144 0.4167 YKGGVNLVSDGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVP 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77803g00001 48 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 48 IPR034294 -
Trme77803g00001 48 SUPERFAMILY Aquaporin-like 6 43 IPR023271 -
Trme77803g00001 48 Gene3D Glycerol uptake facilitator protein. 1 48 IPR023271 -
Trme77803g00001 48 Pfam Major intrinsic protein 4 47 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77803g00001 Trme-Chr77803 159 302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77803g00001 3 48 Major Intrinsic Protein MIP AT4G35100 91.304 2.69e-24 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77803g00001 K09872 - gmx:732604 93.2041