Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77548g00001 ATGGAGAATATCGGATTTGTGAATGATGTGAAGAACTTGATCTTTCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCGGCAAGACTTTCTAATGGATCCGTGACTGGTTGTGTGCCTGTGTCATTTGATCCACAAATCATTACCTCAAACTTCACTCCCTCAGTAGCTAATGGATCTAACCAACCGAGTAATTCATCGCATGGTCCAATGTCTGTTGCTTCTCAACTACCTCCTTTTCGAAGTCGAGAAATAAATAGTCACCGTGGTACTGTATTAACAACTCAATCCCAAAACCTAAACCAGATATTTGATAGCCTTAGTCAACCAAAGGCTCAACGAGAGAATACAACTGTTAAGGCCGAAGCTGAAATGATACCTGCAAATCTCGATTCTTCATCTCTGCAACGGCGTTCTGTTTCATATAATGCAAGATCGACATTCAATGAATTAACTGATTCAAATGTATCCAATCTGAATGGTTTCAGCCATAAACATATGGAGCAACAAATCTTATCAG 529 0.3989 MENIGFVNDVKNLIFQLGCVPGALLSEDYSARLSNGSVTGCVPVSFDPQIITSNFTPSVANGSNQPSNSSHGPMSVASQLPPFRSREINSHRGTVLTTQSQNLNQIFDSLSQPKAQRENTTVKAEAEMIPANLDSSSLQRRSVSYNARSTFNELTDSNVSNLNGFSHKHMEQQILS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77548g00001 176 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77548g00001 Trme-Chr77548 206 734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77548g00001 1 45 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 66.667 8.27e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77548g00001 - - lja:Lj3g3v2948520.1 202.986