Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77527g00001 ATGGATTTGGAACAAGGGGTGGCATCACCAACACAAGACATATTGTCTCACATGTTGTTGACGCGTAATGAAAATGGAGAGTTTTTGAATGAACTTAAAATTGCTGATAAAATTCTTGGCCTTCTAATCGGAGGACATGACACTGCTAGCGCCGCATGCACTTTCATTGTTAAATATCTCGCCGAGCTACCTCACATTTATGATAAAGTCTATCAAGTTGAAAGGGGAGAACCCACCTTGCGTGCCCCACAGGTTTCCCGACGGAGATTAGTCATCGCTAATGGCGGTGGAAAATTCGTACAAATATCATGGTGA 315 0.4317 MDLEQGVASPTQDILSHMLLTRNENGEFLNELKIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDKVYQVERGEPTLRAPQVSRRRLVIANGGGKFVQISW 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77527g00001 104 Pfam Cytochrome P450 10 72 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77527g00001 104 Gene3D Cytochrome P450 3 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77527g00001 104 SUPERFAMILY Cytochrome P450 6 72 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77527g00001 Trme-Chr77527 11 597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77527g00001 2 72 Cytochrome P450 AT5G36110 54.930 1.06e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77527g00001 K20667 - gmx:100801007 130.183