Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme774778g00001 GAAACGGCTATTGAAGCTGCTAAAGCCTATGACAGTGCTGCTTTCAGGATGCGCGGATCTAAGGCGATTCTAAATTTTCCACTTGAAGTCAACGAGGCGGCAGCGGCGGCGGCGGCGGAGACCTCCAGCGACGGTGACAGAAAACGTTGCCGTGAAGAGGATGAGATAGTAGAAGTGATACCGGCGGTGAAAAAGGAGAAAATAACGGAATTTGATGTGAACTGTTTTAAAGAGATGCCGTT 242 0.4959 ETAIEAAKAYDSAAFRMRGSKAILNFPLEVNEAAAAAAAETSSDGDRKRCREEDEIVEVIPAVKKEKITEFDVNCFKEMP 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme774778g00001 80 Gene3D AP2/ERF domain 1 30 IPR036955 GO:0003700|GO:0006355
Trme774778g00001 80 PANTHER DNA-BINDING DOMAIN 1 41 IPR044808 GO:0003700|GO:0009873
Trme774778g00001 80 ProSiteProfiles AP2/ERF domain profile. 1 27 IPR001471 GO:0003700|GO:0006355
Trme774778g00001 80 SUPERFAMILY DNA-binding domain 2 29 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme774778g00001 1 80 AP2-EREBP Transcription Factor Family AT5G47230 51.250 2.39e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme774778g00001 K09286 - gmx:100816039 100.523