Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77432g00001 ATGCAAATTTGCCATCGAGACTTGAAGCTCGAGAACACCTTATTGGATGGCAGCCCTGCCCCGCGGCTCAAAATTTGTGACTTTGGTTATTCTAAGTCATCTCTGCTTCATTCTAGGCCTAAATCAACAGTGGGAACTCCAGCCTACATAGCACCAGAGGTTCTTTCCCGTAGAGAATATGACGGAAAG 189 0.4656 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGK 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77432g00001 63 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Trme77432g00001 63 PANTHER SERINE/THREONINE KINASE 1 63 - -
Trme77432g00001 63 Pfam Protein kinase domain 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme77432g00001 63 Gene3D Transferase(Phosphotransferase) domain 1 1 63 - -
Trme77432g00001 63 ProSiteProfiles Protein kinase domain profile. 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme77432g00001 63 SUPERFAMILY Protein kinase-like (PK-like) 2 61 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77432g00001 Trme-Chr77432 362 744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77432g00001 3 62 CBL-interacting serine-threonine protein kinases AT5G01810 53.731 6.10e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trme77432g00001 Pkinase 1.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77432g00001 K14498 - egt:105970147 132.494