Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77253g00001 ATGGCTAAGCTTAATCTCTTACTTGTCTCGTTACTCTTCTTAACTCTCTGTCTTCATTCATGTCCTACTTATGCTCAACTAAGTCGACACCACTACAAGAATTCCTGTCCTAATGTTGAAAACATTGTCAGAGAAGCTGTCAAAAAGAAATTTCATCAAACATTTACAACTGTTCCTGCCACTCTTCGTCTCTTCTTCCATGACTGCTTTGTTCAG 216 0.3843 MAKLNLLLVSLLFLTLCLHSCPTYAQLSRHHYKNSCPNVENIVREAVKKKFHQTFTTVPATLRLFFHDCFVQ 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77253g00001 72 PANTHER - 8 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme77253g00001 72 Gene3D - 27 72 - -
Trme77253g00001 72 SUPERFAMILY Heme-dependent peroxidases 7 71 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme77253g00001 72 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trme77253g00001 72 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme77253g00001 72 PRINTS Plant peroxidase signature 60 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme77253g00001 72 ProSiteProfiles Plant heme peroxidase family profile. 26 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77253g00001 1 71 Peroxidase AT3G49960 56.338 6.66e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77253g00001 K00430 - gmx:100815654 117.087