Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7716g00001 ATGGATCACATAGTTTCGGCTTACAAACGGACAACAAATAGGGCTATTCTTCTAGACTATGATGGTACACTAATGCCTCAGGTTTCCATTGATAAGAGTCCAATAGGTAAATCCATTGAAATTCTTAATAGCTTGTGTAGAGATAAGAACAACGTGGTGTTTCTTGTTAGTGCCAGAAGCCGAAAGACACTCTCTGAATGGTTTTCTCCTTGCGAGAATCTGGGAATCGCGGCCGAGCACGGCTACTTTCTGAGAATGAAGCGAGACGACGAATGGGAAACTTGTGTTCCTGCAACAGATTGTAGTTGGAAACAAATTGCAGTGCCTGTGATGAAACTTTATACCGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTTTGGTCTTATGAAGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTCGATCATCTCGAGAGTGTTCTGGCAAATGAACCTGGTGTGAGCAAGGGATTAGTGGCGAAACGCCTACTTTCATCGATGGAAGAAAAGGGAATGTCACCTGATTTTGTTTTGTGCATAGGGGATGACAGATCTGACGAAGATATGTTTGAGGTTATCACGAGTTCGATGAACGGTCCAATAGCGCCGAAAGCTGAAGTATTTGCTTGCACCGTTTGTCGGAAACCGAGTAAGGCKAAGTACTATCTTGATGATACTGCTGAAATAGTGAGATTGATTCAAGGTTTAGCATGTGTTTCAGATAAAAAAAGTTTATGCTAA 768 0.4206 MDHIVSAYKRTTNRAILLDYDGTLMPQVSIDKSPIGKSIEILNSLCRDKNNVVFLVSARSRKTLSEWFSPCENLGIAAEHGYFLRMKRDDEWETCVPATDCSWKQIAVPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPGVSKGLVAKRLLSSMEEKGMSPDFVLCIGDDRSDEDMFEVITSSMNGPIAPKAEVFACTVCRKPSKAKYYLDDTAEIVRLIQGLACVSDKKSLC 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7716g00001 255 SUPERFAMILY HAD-like 14 246 IPR036412 -
Trme7716g00001 255 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 162 254 - -
Trme7716g00001 255 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 13 130 - -
Trme7716g00001 255 Pfam Trehalose-phosphatase 17 235 IPR003337 GO:0003824|GO:0005992
Trme7716g00001 255 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 246 IPR001830 GO:0003824|GO:0005992
Trme7716g00001 255 Gene3D - 142 254 IPR023214 -
Trme7716g00001 255 Gene3D - 13 128 IPR023214 -
Trme7716g00001 255 NCBIfam trehalose-phosphatase 13 245 IPR003337 GO:0003824|GO:0005992
Trme7716g00001 255 CDD HAD_TPP 15 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7716g00001 Trme-Chr7716 128 1654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7716g00001 1 251 Trehalose Biosynthesis Gene Families AT1G68020 75.655 1.21e-140 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7716g00001 K16055 - gmx:100818822 441.81